Protease Degradomics
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    • Proteolysis in health and disease
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Lab Alumni


​Annkathrin Ratter, M.Sc. thesis and project worker (11/2024-02/2026)
Automation of shotgun proteomics and phosphopeptide enrichment.
​Next: PhD student, Vivianne Otto lab, ETH Zürich.
Henrique Baeta, Ph.D. thesis (11/2021-09/2025)
Cellular responses to mechanical stress.
Project funded by FOR2743 Mechanical Stress Protection.
Next: Postdoc, Bártfai lab, Radbout University Nijmegen, NL
profile
publications
Sophia Maier, M. Ed. thesis (09/2025-12/2025).
Evolution of the aminopeptidase ICP55. Next: High school teacher qualification. 
​

Julian Goll, M.Sc. thesis (03/2025-08/2025)
Proteomic analysis of strain-induce signaling. 

Marc Gottschling, M.Sc. thesis (03/2025-08/2025).
Optogenetic control of apoptosis.

Alexander Sentimenti, Master of Science 11/2024-08/2025).
mTOR signaling in Physcomitrium. Next: PhD student, Simon Elsässer lab (Freiburg)

Hannah Kühne, M. Ed. thesis (11/2024-05/2025).
OptoCaspase1. Next: High school teacher qualification (Referendariat)

​Vincent Sielaff, B.Sc. thesis (05/2024-08/2024)
Readouts for optogenetic caspases. 

Nicolas Oertel, B.Sc. thesis (05/2024-08/2024)
Readouts for optogenetic caspases

Nepomuk Boerner B.Sc. thesis (04/2024-07/2024)
Plant cell death signaling ​
Alexandros Zografakis
M.Sc., project worker (02/2024-08/2024)
Collaboration in the framework of the JONAS network ​

at Forschungszentrum Juelich (2014-2023):

​​Nicole Kuschel, MSc in biochemistry, 08/2022-04/2023
Proteomics method development
Dr. Maithreyan Kuppusamy, PhD student, 09/2018-12/2022
Proteomic analysis of mechanical stress responses
Current: Scientist at Uniklinik Essen
Maithy's publications
Dr. Max Gilbert, Postdoc, 11/2021-10/2022
Proteomics method development. Next: Scientist at Proteome Sciences, Frankfurt
Martin Matijass, MSc in biochemistry, 01/2022-10/2022
Mechanical stress responses in human muscle.
Next: PhD student at University of Cologne
Erik Gerdes, MSc in plant biology, 01/2022-09/2022
Bacterial effector protease substrates in plants.
​Next: Science communication
Shubham Sharma, MSc in plant biology, 01/2022-09/2022
Aspartic proteases in plant immunity
Next: Proteros biostructures, Munich​
Andreas Perrar, PhD student 03/2017-03/2021
Plant pathogen interactions
Next: Cellex, Cologne
Andreas publications
Dr. Fatih Demir, Postdoc, 08/2015 - 08/2020
Method development, (mostly plant) degradomics
Next: Assistant Professor at Aarhus University
Fatih´s publications
Dr. Jan Schulze-Hüynck, Postdoc, 10/2019 - 08/2020
Plant degradomics. Next: Scientist at Lonza, Switzerland
Tobias Mortsiefer, BSc student, 04/2019 - 08/2019
Plant cell death degradomics
Next: Labomedic, Bonn
Sabrina Dirnberger, BSc student 04/2018 - 09/2018
HUNTER method development
Next position: MSc student at University of Bayreuth
Stefan Niedermaier, PhD student 09/2014 - 07/2018
Method development and plant degradomics. Next: Mass spec technician, COS, University of Heidelberg
Stefan´s publications
Dr. Estibaliz González de San Román Martín, Postdoc 11/2015-03/2018
MALDI mass spectrometry imaging
Next position: MALDI specialist at Polymat, San Sebastián, Spain
Esti´s publications
Dr. Joji Grace Sernestrand (Villamor), Postdoc 10/2015 - 10/2017
Proteolysis in plant-pathogen interactions
Joji´s publications
Marc-Oliver Bahl, BSc student (co-supervised with S. Matsubara, IBG-2)
Acclimation of Arabidopsis to fluctuating light intensities
Next position: MSc student at HHU Düsseldorf
Stefan van Wickeren, BSc student 04/2017 - 09/2017
Degradomic analysis of Deg2 protease knock-out  plants
Next position: MSc student at Westfälische Wilhelms-Universität Münster
Domenic Tuscher, BSc student 04/2017 - 09/2017
Optimizing plant N terminomics
Next position: Staff member at ZEA-3
Dr. Iuliana Susnea, Postdoc 03/2012 - 03/2015
MALDI mass spectrometry imaging
Next position: Scientist at Centogene AG, Rostock, Germany.
Iuliana's publications
Milena Malisic, Technical Assistant 11/2014 - 10/2015, BSc student 02/2018-09/2018
Next position: Fast-track PhD student at CEPLAS
Milenas publications

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  • Home
  • Team
    • Lab Alumni
    • Visiting Scientist
  • Research
    • Plant degradomics
    • Proteolysis in health and disease
    • Method development
  • Publications
  • Join us!
  • Contact